Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | IM33_11035 | Not Available | Positive | 2249598 - 2250296 | 27292.9 |
| membrane protein | IM33_11040 | Not Available | Positive | 2250492 - 2250959 | 17496.1 |
| xre family transcriptional regulator | IM33_11045 | O31834 | Positive | 2250970 - 2251185 | 7911.7 |
| hypothetical protein | IM33_11055 | Not Available | Negative | 2251919 - 2252203 | 11177.3 |
| n-acetylmannosamine kinase | IM33_11060 | P37767 | Negative | 2252414 - 2253286 | 32864.6 |
| sam-dependent methyltransferase | IM33_11065 | O34614 | Negative | 2253688 - 2254269 | 22086.6 |
| pseudouridine synthase | IM33_11070 | P35159 | Negative | 2254312 - 2255028 | 27583.5 |
| membrane protein | IM33_11075 | O34472 | Positive | 2255219 - 2256304 | 41403.1 |
| hypothetical protein | IM33_11080 | Not Available | Negative | 2256458 - 2257108 | 24265.8 |
| diaminopimelate decarboxylase | IM33_11085 | P23630 | Negative | 2257322 - 2258614 | 48028.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
