Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine aminotransferase | IM33_10980 | Q8R7C1 | Negative | 2238498 - 2239685 | 44003.9 |
| acetylglutamate kinase | IM33_10985 | Q188A2 | Negative | 2239741 - 2240592 | 30679.6 |
| arginine biosynthesis protein argj | IM33_10990 | Q8R7B9 | Negative | 2240607 - 2241824 | 43987.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | IM33_10995 | A6M1Z6 | Negative | 2241866 - 2242897 | 38061.2 |
| serine/threonine protein phosphatase | IM33_11005 | Q58322 | Negative | 2243934 - 2244677 | 27942.4 |
| arsr family transcriptional regulator | IM33_11010 | Not Available | Negative | 2244694 - 2245092 | 15488.0 |
| hypothetical protein | IM33_11015 | Not Available | Negative | 2245200 - 2246105 | 32951.1 |
| acetyltransferase | IM33_11020 | O34983 | Negative | 2246861 - 2247625 | 29037.2 |
| gcn5 family acetyltransferase | IM33_11025 | Not Available | Positive | 2247922 - 2248395 | 18310.2 |
| tetr family transcriptional regulator | IM33_11030 | O34892 | Negative | 2248781 - 2249338 | 20717.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
