Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_10930 | Not Available | Negative | 2229991 - 2230587 | 23816.6 |
| plasmid replication protein | IM33_10935 | Not Available | Negative | 2230604 - 2231017 | 16189.8 |
| gntr family transcriptional regulator | IM33_10940 | Not Available | Positive | 2231376 - 2231750 | 13993.9 |
| abc transporter | IM33_10945 | Not Available | Positive | 2231756 - 2232610 | 32601.2 |
| abc transporter permease | IM33_10950 | Not Available | Positive | 2232610 - 2233248 | 23808.4 |
| acetyltransferase | IM33_10955 | Not Available | Positive | 2233738 - 2234151 | 16116.4 |
| peptidase m20 | IM33_10960 | Q01264 | Positive | 2234343 - 2235560 | 44584.5 |
| amino acid racemase | IM33_10965 | P32960 | Positive | 2235698 - 2236396 | 26447.0 |
| hypothetical protein | IM33_10970 | Not Available | Negative | 2236615 - 2237232 | 23134.7 |
| ornithine carbamoyltransferase | IM33_10975 | A6TWW1 | Negative | 2237369 - 2238391 | 38712.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
