Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_10660 | Q4A160 | Positive | 2169618 - 2170304 | 26354.8 |
| histidine kinase | IM33_10665 | P51392 | Positive | 2170294 - 2171325 | 39144.1 |
| abc transporter atp-binding protein | IM33_10670 | Q58903 | Positive | 2171407 - 2172072 | 24436.8 |
| abc transporter permease | IM33_10675 | Not Available | Positive | 2172085 - 2174499 | 91577.6 |
| membrane protein | IM33_10680 | Not Available | Negative | 2174578 - 2175969 | 50756.6 |
| acyl-coa thioesterase | IM33_10685 | A2AKK5 | Negative | 2176137 - 2177435 | 49195.4 |
| kinase | IM33_10690 | Not Available | Negative | 2177743 - 2178618 | 34123.6 |
| membrane protein | IM33_10695 | P96689 | Negative | 2178800 - 2179486 | 23419.5 |
| proline--trna ligase | IM33_10700 | Not Available | Negative | 2179536 - 2180075 | 20736.9 |
| hydrolase | IM33_10705 | Not Available | Negative | 2180131 - 2180763 | 24209.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
