Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_00665 | Not Available | Negative | 101217 - 101570 | 13450.0 |
| hypothetical protein | IM33_00670 | Not Available | Positive | 101786 - 102400 | 23478.6 |
| abc transporter permease | IM33_00675 | Not Available | Positive | 102430 - 103671 | 45253.4 |
| hydrolase | IM33_00680 | Q52532 | Positive | 103739 - 104545 | 29746.3 |
| rna polymerase sigma factor | IM33_00690 | Not Available | Positive | 105272 - 105712 | 17534.7 |
| transcriptional regulator | IM33_00695 | Not Available | Positive | 105693 - 105950 | 9520.56 |
| lysr family transcriptional regulator | IM33_00700 | Q4G384 | Negative | 106938 - 107813 | 32025.2 |
| hypothetical protein | IM33_00705 | Not Available | Positive | 107933 - 108496 | 20378.9 |
| chromate transporter | IM33_00710 | Not Available | Positive | 108493 - 109059 | 20776.2 |
| hypothetical protein | IM33_00715 | Not Available | Negative | 109187 - 109423 | 9422.17 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
