Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | IM33_08865 | P54591 | Positive | 1799058 - 1799774 | 27434.4 |
| abc transporter permease | IM33_08870 | Not Available | Positive | 1799767 - 1800591 | 32076.1 |
| hypothetical protein | IM33_08875 | Not Available | Positive | 1800602 - 1801801 | 46158.6 |
| hypothetical protein | IM33_08880 | Not Available | Positive | 1801810 - 1802622 | 31621.6 |
| hypothetical protein | IM33_08885 | Not Available | Positive | 1802633 - 1803901 | 48128.0 |
| amidohydrolase | IM33_08895 | G3XP38 | Positive | 1804261 - 1805442 | 42555.4 |
| hypothetical protein | IM33_08900 | Not Available | Negative | 1805595 - 1806512 | 34294.7 |
| sodium abc transporter atp-binding protein | IM33_08905 | P46903 | Positive | 1806763 - 1807557 | 29782.0 |
| sodium abc transporter permease | IM33_08910 | P46904 | Positive | 1807558 - 1809624 | 76911.0 |
| diguanylate phosphodiesterase | IM33_08915 | Not Available | Positive | 1810224 - 1811768 | 60299.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
