Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | IM33_07865 | P33655 | Positive | 1598275 - 1600065 | 68794.4 |
| rna polymerase sigma factor rpod | IM33_07870 | P33656 | Positive | 1600083 - 1601249 | 44291.0 |
| sam-dependent methyltransferase | IM33_07875 | P54471 | Positive | 1601414 - 1602103 | 26007.7 |
| ngg1p interacting factor 3 protein, nif3 | IM33_07880 | Q9KD39 | Positive | 1602117 - 1603214 | 41025.4 |
| flavodoxin | IM33_07885 | B7J4K3 | Positive | 1603278 - 1603850 | 20935.3 |
| mfs transporter | IM33_07890 | Not Available | Negative | 1603914 - 1604381 | 17750.2 |
| tryptophan transporter | IM33_07895 | Not Available | Positive | 1604963 - 1605514 | 19835.7 |
| phosphohydrolase | IM33_07900 | Not Available | Negative | 1605651 - 1606127 | 18428.6 |
| membrane protein | IM33_07905 | Not Available | Negative | 1606244 - 1607335 | 42043.9 |
| gntr family transcriptional regulator | IM33_07910 | Not Available | Negative | 1607328 - 1607717 | 14666.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
