Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide transporter | IM33_07595 | Not Available | Positive | 1540080 - 1542008 | 66558.7 |
| hypothetical protein | IM33_07600 | Not Available | Positive | 1541995 - 1542342 | 13738.6 |
| abc transporter | IM33_07605 | O06476 | Negative | 1542586 - 1544505 | 73493.2 |
| hypothetical protein | IM33_07610 | Not Available | Negative | 1544531 - 1545337 | 30570.3 |
| gntr family transcriptional regulator | IM33_07615 | Not Available | Negative | 1545396 - 1546844 | 55526.9 |
| d-alanine--d-alanine ligase | IM33_07620 | B9E560 | Negative | 1546868 - 1547767 | 33526.2 |
| damage-inducible protein cina | IM33_07625 | Q18BS8 | Positive | 1548025 - 1549281 | 45923.7 |
| hydrolase | IM33_07630 | Not Available | Positive | 1549353 - 1550132 | 29346.7 |
| hypothetical protein | IM33_07635 | Not Available | Negative | 1550234 - 1550818 | 22654.2 |
| atpase aaa | IM33_07640 | Not Available | Negative | 1551044 - 1552486 | 54567.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
