Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine-n1)-methyltransferase | IM33_06845 | Q18BC2 | Positive | 1377550 - 1378245 | 27032.7 |
| 50s ribosomal protein l19 | IM33_06850 | Q18BC1 | Positive | 1378430 - 1378780 | 13296.4 |
| gtpase | IM33_06855 | Q819W8 | Positive | 1379102 - 1379998 | 34230.9 |
| branched-chain amino acid transporter | IM33_06860 | Not Available | Positive | 1380387 - 1381679 | 45224.9 |
| branched-chain amino acid transporter | IM33_06865 | Not Available | Positive | 1382812 - 1384104 | 44741.2 |
| ribonucleotide-diphosphate reductase | IM33_06870 | Q9HI70 | Positive | 1384545 - 1386737 | 83440.8 |
| ribonuclease hii | IM33_06875 | Q18BC9 | Positive | 1386797 - 1387564 | 28899.9 |
| (s)-2-hydroxy-acid oxidase | IM33_06880 | Q9LJH5 | Positive | 1387617 - 1388633 | 35604.6 |
| hypothetical protein | IM33_06885 | Not Available | Positive | 1388699 - 1388947 | 9767.54 |
| card family transcriptional regulator | IM33_06890 | Not Available | Negative | 1389115 - 1389612 | 19122.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
