Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | IM33_00330 | Not Available | Positive | 56777 - 57601 | 31534.8 |
| glutamate dehydrogenase | IM33_00335 | P27346 | Positive | 57729 - 58994 | 45970.1 |
| peptidase m56 | IM33_00340 | Not Available | Positive | 59162 - 60304 | 45659.2 |
| cell wall hydrolase | IM33_00350 | Q736M3 | Positive | 60873 - 61919 | 37840.8 |
| aspartate carbamoyltransferase catalytic subunit | IM33_00355 | Q18CS8 | Positive | 62209 - 63129 | 34697.7 |
| diguanylate cyclase | IM33_00360 | Q97FS6 | Positive | 63168 - 63860 | 25748.3 |
| diguanylate cyclase | IM33_00365 | Q18CS6 | Positive | 63853 - 64755 | 32348.7 |
| orotate phosphoribosyltransferase | IM33_00370 | Q18CS5 | Positive | 64840 - 65424 | 21302.0 |
| ketopantoate reductase | IM33_00375 | P65666 | Positive | 65643 - 66569 | 35634.7 |
| lysr family transcriptional regulator | IM33_00380 | P39647 | Negative | 66621 - 67511 | 33715.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
