Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | RA09_70 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | IM33_05400 | A6Q1M7 | Positive | 1082012 - 1083940 | 72073.9 |
| ctsr family transcriptional regulator | IM33_05405 | Q88XZ6 | Positive | 1084401 - 1084865 | 17797.7 |
| dna methylase | IM33_05410 | P37569 | Positive | 1084872 - 1085366 | 19079.9 |
| atp:guanido phosphotransferase | IM33_05415 | Q8R7S0 | Positive | 1085382 - 1086407 | 38765.9 |
| clp protease clpx | IM33_05420 | Q8EU05 | Positive | 1086394 - 1088841 | 91424.1 |
| dna repair protein rada | IM33_05425 | Q9KGG1 | Positive | 1089022 - 1090395 | 50277.1 |
| dna integrity scanning protein disa | IM33_05430 | Q18CB2 | Positive | 1090398 - 1091468 | 40385.5 |
| dna-binding protein | IM33_05435 | Q06754 | Positive | 1091557 - 1092651 | 40257.2 |
| membrane protein | IM33_05440 | Not Available | Positive | 1092780 - 1094957 | 80731.5 |
| arac family transcriptional regulator | IM33_05445 | Not Available | Negative | 1095161 - 1096015 | 33500.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
