Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium cochlearium |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | pit mud; silage |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2424 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05216497_1256 | Not Available | Positive | 2115022 - 2115660 | 24211.5 |
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN05216497_1257 | Not Available | Positive | 2115882 - 2117036 | 41580.9 |
| competence/damage-inducible protein cina | SAMN05216497_1258 | Not Available | Negative | 2117115 - 2118344 | 44790.9 |
| lema protein | SAMN05216497_1259 | Not Available | Positive | 2118492 - 2119067 | 21454.7 |
| uncharacterized protein | SAMN05216497_12510 | Not Available | Positive | 2119071 - 2119898 | 29426.0 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN05216497_12511 | Not Available | Positive | 2120104 - 2121486 | 51848.2 |
| moxr-like atpase | SAMN05216497_12512 | Not Available | Positive | 2121558 - 2122508 | 35854.2 |
| protein of unknown function duf58 | SAMN05216497_12513 | Not Available | Positive | 2122505 - 2123659 | 45982.2 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05216497_12514 | Not Available | Positive | 2123686 - 2125920 | 88560.3 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05216497_12515 | Not Available | Positive | 2125998 - 2126696 | 27016.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
