Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium cochlearium |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | pit mud; silage |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2424 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05216497_12112 | Not Available | Negative | 1999969 - 2000757 | 30125.3 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05216497_12113 | Not Available | Negative | 2000935 - 2003535 | 98810.5 |
| helix-turn-helix domain-containing protein | SAMN05216497_12114 | Not Available | Negative | 2003670 - 2004947 | 50688.4 |
| tetratricopeptide repeat-containing protein | SAMN05216497_12115 | Not Available | Negative | 2004951 - 2006255 | 50613.1 |
| ytxh-like protein | SAMN05216497_12116 | Not Available | Negative | 2006495 - 2006662 | 6511.39 |
| ribonuclease hi | SAMN05216497_12117 | Not Available | Negative | 2006759 - 2007205 | 16846.4 |
| uncharacterized membrane protein ykva, duf1232 family | SAMN05216497_12118 | Not Available | Negative | 2007247 - 2008218 | 36670.1 |
| cell division protease ftsh | SAMN05216497_12119 | Not Available | Positive | 2008712 - 2010442 | 64349.7 |
| rhomboid family peptidase. serine peptidase. merops family s54 | SAMN05216497_12120 | Not Available | Negative | 2010510 - 2011568 | 39888.8 |
| hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant) | SAMN05216497_12121 | Not Available | Negative | 2011609 - 2012667 | 40322.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
