Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium cochlearium |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | pit mud; silage |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2424 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05216497_11271 | Not Available | Positive | 1599420 - 1600289 | 31668.6 |
| transketolase | SAMN05216497_11272 | Not Available | Positive | 1600589 - 1602577 | 73749.7 |
| putative amidase domain-containing protein | SAMN05216497_11273 | Not Available | Negative | 1602629 - 1603840 | 46854.3 |
| hutp protein | SAMN05216497_11274 | Not Available | Positive | 1603957 - 1604373 | 14743.1 |
| ssu ribosomal protein s9p | SAMN05216497_1131 | Not Available | Negative | 1604963 - 1605355 | 14718.2 |
| lsu ribosomal protein l13p | SAMN05216497_1132 | Not Available | Negative | 1605386 - 1605820 | 16535.4 |
| trna pseudouridine38-40 synthase | SAMN05216497_1133 | Not Available | Negative | 1605956 - 1606702 | 28262.1 |
| energy-coupling factor transport system permease protein | SAMN05216497_1134 | Not Available | Negative | 1606704 - 1607501 | 29994.4 |
| energy-coupling factor transport system atp-binding protein | SAMN05216497_1135 | Not Available | Negative | 1607514 - 1608380 | 32355.6 |
| energy-coupling factor transport system atp-binding protein | SAMN05216497_1136 | Not Available | Negative | 1608365 - 1609210 | 31644.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
