Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium cochlearium |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | pit mud; silage |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2424 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydrogenase | SAMN05216497_11055 | Not Available | Negative | 1452492 - 1453553 | 37927.2 |
| kynurenine formamidase | SAMN05216497_11056 | Not Available | Negative | 1453877 - 1454509 | 23867.9 |
| dna topoisomerase-3 | SAMN05216497_11057 | Not Available | Negative | 1454496 - 1456682 | 84376.1 |
| urocanate reductase | SAMN05216497_11058 | Not Available | Negative | 1456898 - 1458658 | 63326.3 |
| two-component system, sensor histidine kinase yesm | SAMN05216497_11059 | Not Available | Positive | 1458870 - 1460582 | 65529.7 |
| two component transcriptional regulator, arac family | SAMN05216497_11060 | Not Available | Positive | 1460570 - 1461349 | 30196.4 |
| superfamily ii dna or rna helicase, snf2 family | SAMN05216497_11061 | Not Available | Negative | 1461370 - 1464621 | 126570.0 |
| uncharacterized membrane protein ycze | SAMN05216497_11062 | Not Available | Negative | 1464647 - 1465273 | 22583.0 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN05216497_11063 | Not Available | Negative | 1465544 - 1467553 | 73824.3 |
| trna pseudouridine38-40 synthase | SAMN05216497_11064 | Not Available | Positive | 1467781 - 1468518 | 28472.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
