Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium cochlearium |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | pit mud; silage |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2424 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | SAMN05216497_10965 | Not Available | Positive | 1390686 - 1391663 | 36016.8 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN05216497_10966 | Not Available | Positive | 1391776 - 1393026 | 44299.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216497_10967 | Not Available | Positive | 1393211 - 1394725 | 58716.5 |
| putative abc transport system substrate-binding protein | SAMN05216497_10968 | Not Available | Positive | 1395102 - 1396064 | 34753.2 |
| transglutaminase-like superfamily protein | SAMN05216497_10969 | Not Available | Positive | 1396126 - 1397490 | 52309.8 |
| protein of unknown function | SAMN05216497_10970 | Not Available | Negative | 1397615 - 1398040 | 16968.8 |
| hypothetical protein | SAMN05216497_1101 | Not Available | Positive | 1398425 - 1398541 | 4547.69 |
| positive regulator of sigma(e), rsec/mucc | SAMN05216497_1102 | Not Available | Positive | 1399140 - 1399574 | 15743.3 |
| glycerol kinase | SAMN05216497_1103 | Not Available | Negative | 1399625 - 1401121 | 55325.0 |
| glycerol uptake operon antiterminator | SAMN05216497_1104 | Not Available | Negative | 1401340 - 1401912 | 21113.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
