Bacillus pumilus str. Pine1

Gram-positiveRodMotileAerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus pumilus strain Pine1 is a Gram-positive, rod-shaped bacterium that demonstrates the ability to sporulate and thrives in terrestrial environments as an aerobic organism. This organism is characterized by its robust survival mechanisms, including the formation of endospores, which allow it to endure extreme conditions in its habitat. As a member of the Bacillus genus, B. pumilus Pine1 is notable for its metabolic versatility, enabling it to utilize various organic compounds in the presence of oxygen. The sporulation process is a critical survival strategy employed by B. pumilus Pine1, facilitating its persistence in environments that may experience fluctuations in nutrient availability or stressors such as desiccation. The presence of endospores is not only significant for the survival of the organism but also indicates potential applications in biotechnology, particularly in bioremediation and as a biofertilizer. Understanding the ecological role of B. pumilus Pine1 in terrestrial ecosystems contributes to insights into its interactions with soil microbiomes and its potential impact on nutrient cycling. This bacterium, through its aerobic metabolism and sporulation capabilities, may play a crucial role in maintaining soil health and fertility, highlighting the importance of microbial diversity in terrestrial habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus pumilus
StrainPine1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Bacillus pumilus str. Pine1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacillus pumilus strain Pine1 NODE_186_length_505_cov_0.629630,

Gene Summary

Adenine Count

1099789 bp

Thymine Count

1086697 bp

Guanine Count

808967 bp

Cytosine Count

784324 bp

Genome Length

3779777 bp

Protein-coding Genes

3769 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm peptidoglycan-binding domain-containing proteinFCO27_12695Not AvailablePositive2428271 - 242958746311.8
superoxide dismutase family proteinFCO27_12700Not AvailablePositive2429663 - 243024120673.5
moxr family atpaseFCO27_12705Not AvailablePositive2430331 - 243120931978.5
vwa domain-containing proteinFCO27_12710Not AvailablePositive2431221 - 243313773916.9
2-oxoglutarate dehydrogenase e1 componentFCO27_12715Not AvailablePositive2433362 - 2436196106889.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseFCO27_12720Not AvailablePositive2436211 - 243746745454.4
bile acid:sodium symporter family proteinFCO27_12725Not AvailableNegative2437503 - 243845334000.0
superoxide dismutaseFCO27_12730Not AvailableNegative2438600 - 243942132434.3
squalene--hopene cyclaseFCO27_12735Not AvailableNegative2439414 - 244128871513.7
aldehyde dehydrogenase family proteinFCO27_12740Not AvailableNegative2441391 - 244287553695.8

Displaying genes 2561 – 2570 of 3924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Food poisoningCausesPMC6402940
Food poisoningCausesPMC9658697
Plant pathogensCausesPMC12287039

Displaying health effects 1 – 3 of 3 in total