Bacillus mycoides str. VD078

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus mycoides str. VD078 is a Gram-positive, rod-shaped bacterium that thrives in the unique and extreme environment of the deep sea, specifically within the Iheya Ridge hydrothermal vent field of the Okinawa Trough. This microbe exhibits facultative anaerobic characteristics, allowing it to adapt to varying oxygen levels in its habitat, which is characterized by high pressure, elevated temperatures, and the presence of sulfide-rich environments. The adaptation of Bacillus mycoides str. VD078 to hydrothermal vent conditions suggests its potential involvement in biogeochemical cycling, particularly in sulfur and carbon processes, which are critical in such extreme ecosystems. Its ability to survive in a deep-sea habitat may also indicate the presence of unique metabolic pathways that could be leveraged for biotechnological applications, such as bioremediation or bioenergy production. The strain's resilience in an oligotrophic environment underscores the remarkable diversity and adaptability of microbial life in extreme conditions, contributing to our understanding of microbial ecology in the deep-sea ecosystem. Further research into its metabolic capabilities may reveal insights into microbial interactions and nutrient dynamics in hydrothermal vent communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus mycoides
StrainVD078

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Bacillus mycoides str. VD078
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangepsychrotolerant
Habitatdeep sea; Iheya Ridge hydrothermal vent field of Okinawa Trough
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Bacillus mycoides strain VD078 cont1.65, whole genome shotgun

Gene Summary

Adenine Count

1968984 bp

Thymine Count

1960905 bp

Guanine Count

1066225 bp

Cytosine Count

1052528 bp

Genome Length

6048642 bp

Protein-coding Genes

6093 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent rna helicase dbpaIII_00091Not AvailablePositive92338 - 9378354349.2
5s ribosomal rnaNot AvailableNot AvailablePositive94242 - 94356Not Available
hypothetical proteinIII_00092Not AvailableNegative93827 - 9438721493.9
23s ribosomal rnaNot AvailableNot AvailablePositive94450 - 97369Not Available
hemolysin iii family channel proteinIII_00093Not AvailablePositive94552 - 9519923946.4
udp-glucose 4-epimeraseIII_00094Not AvailablePositive95383 - 9639937448.6
hypothetical proteinIII_00095Not AvailableNegative96449 - 9790655897.1
hypothetical proteinIII_00096Not AvailableNegative97894 - 9931554229.1
hypothetical proteinIII_00097Not AvailableNegative99319 - 10115168706.8
hypothetical proteinIII_00098Not AvailableNegative101135 - 10205535933.6

Displaying genes 141 – 150 of 6207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Food poisoningCausesPMC6842932
EmesisCausesPMC2783214

Displaying health effects 1 – 2 of 2 in total