Enterococcus faecium str. DB-1

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Enterococcus

Description

Enterococcus faecium strain DB-1 is a Gram-positive, cocci-shaped bacterium that exhibits facultative anaerobic metabolism. This strain is notably isolated from fermented mare milk, indicating its adaptation to a specific niche within dairy fermentation processes. As a member of the Enterococcus genus, E. faecium is characterized by its ability to thrive in various environments, and its presence in fermented mare milk suggests a potential role in the development of unique flavor profiles and preservation of this traditional dairy product. Facultative anaerobes such as E. faecium can utilize oxygen when available, but also possess the capability to ferment substrates in anaerobic conditions, thereby enhancing its survival and metabolic versatility in diverse environments. The adaptation to the fermented mare milk habitat may also imply a symbiotic relationship with the host, contributing to the fermentation process while potentially influencing the microbial community dynamics within the milk. Understanding the traits of Enterococcus faecium strain DB-1 not only sheds light on its ecological role in dairy fermentation but also may provide insights into the metabolic pathways utilized by lactic acid bacteria in similar habitats, highlighting the importance of microbial interactions in food production systems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusEnterococcus
SpeciesEnterococcus faecium
StrainDB-1

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Enterococcus faecium str. DB-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented mare milk
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Enterococcus faecium strain DB-1 chromosome, complete genome.

Gene Summary

Adenine Count

817875 bp

Thymine Count

825983 bp

Guanine Count

507317 bp

Cytosine Count

509820 bp

Genome Length

2660995 bp

Protein-coding Genes

2446 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-dependent oxidoreductaseFHJ99_RS00820Not AvailablePositive85085 - 8571423210.7
mbl fold metallo-hydrolaseFHJ99_RS00825Not AvailableNegative85817 - 8662630489.3
two-component system regulatory protein yyciFHJ99_RS00830Not AvailableNegative86681 - 8755032960.4
yych family regulatory proteinFHJ99_RS00835Not AvailableNegative87551 - 8886750038.8
cell wall metabolism sensor histidine kinase walkFHJ99_RS00840Not AvailableNegative88864 - 9069969764.3
response regulator yycfFHJ99_RS00845Not AvailableNegative90704 - 9140826788.2
degv family proteinFHJ99_RS00850Not AvailableNegative91598 - 9245831647.2
duf1836 domain-containing proteinFHJ99_RS00855Not AvailableNegative92445 - 9301421895.8
Trna-lysNot AvailableNot AvailablePositive93395 - 93467Not Available
is30 family transposaseFHJ99_RS00865Not AvailablePositive93644 - 9459736579.7

Displaying genes 201 – 210 of 2834 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Urinary tract infectionsCausesPMC11784074
EndocarditisCausesPMC11784074
Bloodstream infectionsCausesPMC11784074
Human infectionCausesPMC6222123
Nosocomial infectionCausesPMC6222123
EndocarditisCausesPMC6385395
Infected pancreatic necrosisCausesPMC9466706
Systemic infectionCausesPMC9466706
Nosocomial infectionsCausesPMC5727370
Urinary tract infectionsCausesPMC8879582

Displaying health effects 1 – 10 of 13 in total