Dermacoccus nishinomiyaensis str. TSA37

Gram-positiveCocciAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermacoccaceae

Genus

Dermacoccus

Description

Dermacoccus nishinomiyaensis str. TSA37 is a Gram-positive, aerobic coccus that exhibits a characteristic spherical shape. This microbe is part of the larger genus Dermacoccus, which is known for its potential utility in various biotechnological applications owing to its unique metabolic capabilities. As an aerobic organism, D. nishinomiyaensis str. TSA37 requires oxygen for growth, which suggests that it may play a role in environments where oxygen is abundant. The Gram-positive nature of this strain indicates the presence of a thick peptidoglycan layer in its cell wall, a feature commonly associated with increased resistance to certain environmental stresses and influence on its interaction with other microorganisms. While specific ecological niches for D. nishinomiyaensis str. TSA37 are not detailed, the adaptability of aerobic cocci in diverse habitats suggests that this organism may thrive in environments rich in organic matter or other substrates conducive to aerobic metabolism. Understanding the traits of Dermacoccus nishinomiyaensis str. TSA37 could provide insights into the ecological roles of aerobic cocci in microbial communities, particularly in relation to nutrient cycling and the degradation of organic materials. Further research into its physiological characteristics may elucidate its potential applications in bioremediation or industrial biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusDermacoccus
SpeciesDermacoccus nishinomiyaensis
StrainTSA37

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmidgut ant
Biotic relationshipNot Available
Host(s)Lasius niger
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermacoccus nishinomiyaensis strain TSA37

Gene Summary

Adenine Count

484944 bp

Thymine Count

485213 bp

Guanine Count

1077850 bp

Cytosine Count

1082585 bp

Genome Length

3130592 bp

Protein-coding Genes

2708 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit yajcFA951_03835Not AvailableNegative811065 - 81137011116.6
holliday junction branch migration dna helicase ruvbFA951_03840Not AvailableNegative811455 - 81254939521.0
holliday junction branch migration protein ruvaFA951_03845Not AvailableNegative812546 - 81315120471.7
crossover junction endodeoxyribonuclease ruvcFA951_03850Not AvailableNegative813148 - 81380722543.0
yebc/pmpr family dna-binding transcriptional regulatorFA951_03855Not AvailableNegative813940 - 81471327138.7
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtFA951_03860Not AvailableNegative814850 - 81546721508.0
potassium transporter kupFA951_03865Not AvailablePositive815561 - 81748369546.2
pyridoxal 5'-phosphate synthase lyase subunit pdxsFA951_03870Not AvailableNegative817609 - 81851732062.5
hypothetical proteinFA951_03875Not AvailableNegative818679 - 81933823056.2
glycosyltransferase family 4 proteinFA951_03880Not AvailableNegative819335 - 82048039922.6

Displaying genes 751 – 760 of 2768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.