Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Site-specific recombinase for integration and excision | SAMN04487832_1145 | Not Available | Negative | 2810731 - 2812284 | 59884.6 |
| hypothetical protein | SAMN04487832_1146 | Not Available | Negative | 2812281 - 2812673 | 14755.0 |
| Site-specific recombinase for integration and excision | SAMN04487832_1147 | Not Available | Negative | 2812655 - 2814205 | 58594.8 |
| Attr | Not Available | Not Available | Positive | 2814209 - 2814221 | Not Available |
| hypothetical protein | SAMN04487832_1148 | Not Available | Negative | 2814236 - 2814427 | 7405.76 |
| Hsp20 | SAMN04487832_1149 | Not Available | Positive | 2814643 - 2815086 | 16875.1 |
| hypothetical protein | SAMN04487832_11410 | Not Available | Positive | 2815294 - 2815908 | 22546.7 |
| transporter family protein | SAMN04487832_11411 | Not Available | Positive | 2815982 - 2816395 | 14831.8 |
| Endolysin | SAMN04487832_11412 | Not Available | Negative | 2816455 - 2817639 | 43523.0 |
| hypothetical protein | SAMN04487832_11413 | Not Available | Positive | 2817771 - 2818355 | 23255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
