Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent protease (includes spoivfb) | SAMN02910353_00547 | Not Available | Positive | 604263 - 604949 | 25635.6 |
| condensin subunit scpa | SAMN02910353_00548 | Not Available | Positive | 604949 - 605707 | 29074.5 |
| segregation and condensation protein b | SAMN02910353_00549 | Not Available | Positive | 605677 - 606345 | 24040.3 |
| hypothetical protein | SAMN02910353_00550 | Not Available | Positive | 606369 - 607244 | 32501.9 |
| sporulation protein ytfj | SAMN02910353_00551 | Not Available | Positive | 607255 - 607671 | 14439.2 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02910353_00552 | Not Available | Positive | 607733 - 608854 | 40104.6 |
| 23s rrna pseudouridine2605 synthase | SAMN02910353_00553 | Not Available | Positive | 608889 - 609596 | 26542.6 |
| hypothetical protein | SAMN02910353_00554 | Not Available | Positive | 609598 - 609969 | 13569.2 |
| homoserine o-succinyltransferase | SAMN02910353_00555 | Not Available | Positive | 609997 - 610944 | 37293.2 |
| hypothetical protein | SAMN02910353_00556 | Not Available | Positive | 610994 - 611629 | 23257.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
