Piscirickettsia salmonis str. PM32597B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM32597B1 is characterized by a unique genomic architecture, containing five distinct replicons that contribute to its genetic diversity and adaptability. The strain's genome is cataloged under multiple accessions, specifically NZ_CP012511.1, NZ_CP012512.1, NZ_CP012510.1, NZ_CP012508.1, and NZ_CP012509.1, indicating a complex genomic organization that may facilitate various biological functions. The presence of multiple replicons suggests a potential for varied gene regulation and metabolic pathways, which could enhance its survival in diverse environments. This genetic complexity may also play a role in the organism's interactions within its ecological niche, particularly in aquatic systems where it may influence host-microbe dynamics. Given its genomic attributes, Piscirickettsia salmonis str. PM32597B1 may exhibit a capacity for rapid adaptation to changing conditions, which is critical for survival in fluctuating ecosystems. Understanding the genomic characteristics of this strain could provide insights into its ecological roles and interactions in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM32597B1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3,

Gene Summary

Adenine Count

55262 bp

Thymine Count

55322 bp

Guanine Count

35685 bp

Cytosine Count

34766 bp

Genome Length

181035 bp

Protein-coding Genes

134 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
upf0149 family proteinKU39_RS13575Not AvailableNegative2781501 - 278209121179.3
tigr02449 family proteinKU39_RS13580Not AvailablePositive2782236 - 27824608499.48
cell division protein zapaKU39_RS13585Not AvailablePositive2782441 - 278277012677.3
Ncrna_class:otherNot AvailableNot AvailablePositive2782780 - 2782960Not Available
5-formyltetrahydrofolate cyclo-ligaseKU39_RS13590Not AvailablePositive2782997 - 278356021129.7
eve domain-containing proteinKU39_RS13595Not AvailablePositive2783597 - 278405817768.3
methyl-accepting chemotaxis proteinKU39_RS13600Not AvailablePositive2784130 - 278582161652.4
3'(2'),5'-bisphosphate nucleotidase cysqKU39_RS13605Not AvailableNegative2785871 - 278667129889.8
adp compounds hydrolase nudeKU39_RS13610Not AvailableNegative2786698 - 278724620930.1
ribosome-associated heat shock protein hsp15KU39_RS13615Not AvailablePositive2787376 - 278776814901.0

Displaying genes 3321 – 3330 of 3764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.