Piscirickettsia salmonis str. PM32597B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM32597B1 is characterized by a unique genomic architecture, containing five distinct replicons that contribute to its genetic diversity and adaptability. The strain's genome is cataloged under multiple accessions, specifically NZ_CP012511.1, NZ_CP012512.1, NZ_CP012510.1, NZ_CP012508.1, and NZ_CP012509.1, indicating a complex genomic organization that may facilitate various biological functions. The presence of multiple replicons suggests a potential for varied gene regulation and metabolic pathways, which could enhance its survival in diverse environments. This genetic complexity may also play a role in the organism's interactions within its ecological niche, particularly in aquatic systems where it may influence host-microbe dynamics. Given its genomic attributes, Piscirickettsia salmonis str. PM32597B1 may exhibit a capacity for rapid adaptation to changing conditions, which is critical for survival in fluctuating ecosystems. Understanding the genomic characteristics of this strain could provide insights into its ecological roles and interactions in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM32597B1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3,

Gene Summary

Adenine Count

55262 bp

Thymine Count

55322 bp

Guanine Count

35685 bp

Cytosine Count

34766 bp

Genome Length

181035 bp

Protein-coding Genes

134 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-phosphoserine/phosphohydroxythreonine transaminaseKU39_RS11020Not AvailableNegative2268769 - 226985740362.2
dna gyrase subunit aKU39_RS11025Not AvailableNegative2269896 - 227253298294.1
hypothetical proteinKU39_RS20920Not AvailablePositive2273494 - 22736556397.83
is982 family transposaseKU39_RS11030Not AvailablePositive2273827 - 22740609606.52
trz/atz family hydrolaseKU39_RS11035Not AvailablePositive2274337 - 227565648671.1
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigKU39_RS11040Not AvailablePositive2275660 - 227637626924.5
had family hydrolaseKU39_RS11045Not AvailablePositive2276373 - 227701424051.0
arsi/cadi family heavy metal resistance metalloenzymeKU39_RS11050Not AvailableNegative2277390 - 227784517328.3
metalloregulator arsr/smtb family transcription factorKU39_RS11055Not AvailableNegative2277937 - 227832915379.0
acr3 family arsenite efflux transporterKU39_RS11060Not AvailableNegative2278334 - 227928135169.7

Displaying genes 2791 – 2800 of 3764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.