Piscirickettsia salmonis str. PM32597B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM32597B1 is characterized by a unique genomic architecture, containing five distinct replicons that contribute to its genetic diversity and adaptability. The strain's genome is cataloged under multiple accessions, specifically NZ_CP012511.1, NZ_CP012512.1, NZ_CP012510.1, NZ_CP012508.1, and NZ_CP012509.1, indicating a complex genomic organization that may facilitate various biological functions. The presence of multiple replicons suggests a potential for varied gene regulation and metabolic pathways, which could enhance its survival in diverse environments. This genetic complexity may also play a role in the organism's interactions within its ecological niche, particularly in aquatic systems where it may influence host-microbe dynamics. Given its genomic attributes, Piscirickettsia salmonis str. PM32597B1 may exhibit a capacity for rapid adaptation to changing conditions, which is critical for survival in fluctuating ecosystems. Understanding the genomic characteristics of this strain could provide insights into its ecological roles and interactions in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM32597B1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3,

Gene Summary

Adenine Count

55262 bp

Thymine Count

55322 bp

Guanine Count

35685 bp

Cytosine Count

34766 bp

Genome Length

181035 bp

Protein-coding Genes

134 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinKU39_RS21965Not AvailableNegative2242882 - 22431339396.6
mfs transporterKU39_RS10880Not AvailablePositive2243279 - 224472452317.9
is3 family transposaseKU39_RS10885Not AvailableNegative2244958 - 224577331612.5
is982 family transposaseKU39_RS10890Not AvailableNegative2245920 - 224679533577.7
helix-turn-helix domain-containing proteinKU39_RS10895Not AvailableNegative2246876 - 22470586758.28
is982 family transposaseKU39_RS10900Not AvailableNegative2247197 - 224803632445.2
hypothetical proteinKU39_RS10905Not AvailableNegative2248247 - 224852810098.9
thiamine-phosphate kinaseKU39_RS10910Not AvailableNegative2249086 - 225010537504.9
transcription antitermination factor nusbKU39_RS10915Not AvailableNegative2250092 - 225051416293.6
6,7-dimethyl-8-ribityllumazine synthaseKU39_RS10920Not AvailableNegative2250516 - 225098916534.2

Displaying genes 2761 – 2770 of 3764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.