Piscirickettsia salmonis str. PM32597B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM32597B1 is characterized by a unique genomic architecture, containing five distinct replicons that contribute to its genetic diversity and adaptability. The strain's genome is cataloged under multiple accessions, specifically NZ_CP012511.1, NZ_CP012512.1, NZ_CP012510.1, NZ_CP012508.1, and NZ_CP012509.1, indicating a complex genomic organization that may facilitate various biological functions. The presence of multiple replicons suggests a potential for varied gene regulation and metabolic pathways, which could enhance its survival in diverse environments. This genetic complexity may also play a role in the organism's interactions within its ecological niche, particularly in aquatic systems where it may influence host-microbe dynamics. Given its genomic attributes, Piscirickettsia salmonis str. PM32597B1 may exhibit a capacity for rapid adaptation to changing conditions, which is critical for survival in fluctuating ecosystems. Understanding the genomic characteristics of this strain could provide insights into its ecological roles and interactions in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM32597B1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3,

Gene Summary

Adenine Count

55262 bp

Thymine Count

55322 bp

Guanine Count

35685 bp

Cytosine Count

34766 bp

Genome Length

181035 bp

Protein-coding Genes

134 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertion efficiency factor yiddKU39_RS08930Not AvailableNegative1856149 - 18563888908.19
ribosome hibernation-promoting factor, hpf/yfia familyKU39_RS08935Not AvailablePositive1856724 - 185705312232.8
superoxide dismutaseKU39_RS08940Not AvailableNegative1857143 - 185772721832.5
7-cyano-7-deazaguanine synthase quecKU39_RS08945Not AvailableNegative1857863 - 185854924529.2
nad(p)/fad-dependent oxidoreductaseKU39_RS08950Not AvailableNegative1858673 - 185986343922.2
plp-dependent aminotransferase family proteinKU39_RS08955Not AvailableNegative1860073 - 186149752630.1
dmt family transporterKU39_RS08960Not AvailablePositive1861667 - 186260534532.4
enoyl-coa hydratase-related proteinKU39_RS08965Not AvailablePositive1862677 - 186347729931.5
hypothetical proteinKU39_RS08970Not AvailableNegative1863481 - 186423026354.2
type vi secretion system vgr family proteinKU39_RS08975Not AvailableNegative1864303 - 186577255470.5

Displaying genes 2391 – 2400 of 3764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.