Piscirickettsia salmonis str. PM32597B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM32597B1 is characterized by a unique genomic architecture, containing five distinct replicons that contribute to its genetic diversity and adaptability. The strain's genome is cataloged under multiple accessions, specifically NZ_CP012511.1, NZ_CP012512.1, NZ_CP012510.1, NZ_CP012508.1, and NZ_CP012509.1, indicating a complex genomic organization that may facilitate various biological functions. The presence of multiple replicons suggests a potential for varied gene regulation and metabolic pathways, which could enhance its survival in diverse environments. This genetic complexity may also play a role in the organism's interactions within its ecological niche, particularly in aquatic systems where it may influence host-microbe dynamics. Given its genomic attributes, Piscirickettsia salmonis str. PM32597B1 may exhibit a capacity for rapid adaptation to changing conditions, which is critical for survival in fluctuating ecosystems. Understanding the genomic characteristics of this strain could provide insights into its ecological roles and interactions in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM32597B1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3,

Gene Summary

Adenine Count

55262 bp

Thymine Count

55322 bp

Guanine Count

35685 bp

Cytosine Count

34766 bp

Genome Length

181035 bp

Protein-coding Genes

134 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit yajcKU39_RS05850Not AvailablePositive1214721 - 121507412327.3
protein translocase subunit secdKU39_RS05855Not AvailablePositive1215095 - 121696367198.7
protein translocase subunit secfKU39_RS05860Not AvailablePositive1216985 - 121792934333.4
hypothetical proteinKU39_RS05865Not AvailablePositive1218163 - 121844110307.7
transglycosylase slt domain-containing proteinKU39_RS05870Not AvailableNegative1218804 - 121944224709.4
aminodeoxychorismate synthase component iKU39_RS05875Not AvailableNegative1219417 - 122083553424.2
m15 family metallopeptidaseKU39_RS05880Not AvailablePositive1221042 - 122171925805.5
serine--trna ligaseKU39_RS05885Not AvailablePositive1221840 - 122311447670.1
hypothetical proteinKU39_RS05890Not AvailablePositive1223182 - 122393727450.0
tigr01777 family oxidoreductaseKU39_RS05895Not AvailablePositive1223989 - 122490633613.2

Displaying genes 1751 – 1760 of 3764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.