Piscirickettsia salmonis str. PM15972A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM15972A1 is characterized by a complex genomic structure comprising five replicons. The organism's genetic information is cataloged under several genome accessions, including NZ_CP012416.1, NZ_CP012414.1, NZ_CP012413.1, NZ_CP012415.1, and NZ_CP012417.1, reflecting its genomic diversity and potential adaptability. The presence of multiple replicons suggests a unique evolutionary strategy that may enable the microbe to optimize its genetic functions and respond to environmental pressures in aquatic habitats. This trait is particularly significant for understanding the organism's potential role in its ecological niche and its interactions with host organisms. The complexity inherent in the genomic structure of Piscirickettsia salmonis str. PM15972A1 highlights the importance of genomic studies in elucidating the functional capabilities and evolutionary pathways of marine microbes. These insights can facilitate further research into the biological significance of this strain within its aquatic ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM15972A1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3,

Gene Summary

Adenine Count

26069 bp

Thymine Count

24724 bp

Guanine Count

15821 bp

Cytosine Count

15516 bp

Genome Length

82130 bp

Protein-coding Genes

89 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseKW89_RS01115Not AvailablePositive213142 - 21348612860.7
phosphomethylpyrimidine synthase thicKW89_RS01120Q2P755Negative213560 - 21544370717.8
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseKW89_RS01125Q83CM5Positive215765 - 21726453797.2
exodeoxyribonuclease iiiKW89_RS01130O26314Positive217354 - 21813630076.4
spfh domain-containing proteinKW89_RS01135P0AA55Positive218263 - 21918333423.9
nfed family proteinKW89_RS01140P0AAS3Positive219208 - 21966617135.5
hypothetical proteinKW89_RS01145Not AvailableNegative219711 - 22097647999.0
hypothetical proteinKW89_RS01150Not AvailableNegative221555 - 22227426561.7
transposaseKW89_RS01155Not AvailableNegative222377 - 22343840932.0
nudix family hydrolaseKW89_RS01160P44932Positive224157 - 22506833780.3

Displaying genes 411 – 420 of 3454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.