Piscirickettsia salmonis str. PM15972A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM15972A1 is characterized by a complex genomic structure comprising five replicons. The organism's genetic information is cataloged under several genome accessions, including NZ_CP012416.1, NZ_CP012414.1, NZ_CP012413.1, NZ_CP012415.1, and NZ_CP012417.1, reflecting its genomic diversity and potential adaptability. The presence of multiple replicons suggests a unique evolutionary strategy that may enable the microbe to optimize its genetic functions and respond to environmental pressures in aquatic habitats. This trait is particularly significant for understanding the organism's potential role in its ecological niche and its interactions with host organisms. The complexity inherent in the genomic structure of Piscirickettsia salmonis str. PM15972A1 highlights the importance of genomic studies in elucidating the functional capabilities and evolutionary pathways of marine microbes. These insights can facilitate further research into the biological significance of this strain within its aquatic ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM15972A1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3,

Gene Summary

Adenine Count

26069 bp

Thymine Count

24724 bp

Guanine Count

15821 bp

Cytosine Count

15516 bp

Genome Length

82130 bp

Protein-coding Genes

89 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional udp-4-keto-pentose/udp-xylose synthaseKW89_RS11250B7MG22Negative2255464 - 225648038871.2
glycosyltransferaseKW89_RS11255A1JPP5Negative2256483 - 225749038678.0
degt/dnrj/eryc1/strs aminotransferase family proteinKW89_RS11260Not AvailableNegative2257494 - 225865743120.8
small multidrug resistance family proteinKW89_RS11265Not AvailableNegative2258663 - 225902513081.8
glycosyltransferase family 39 proteinKW89_RS11270B2VBI7Negative2259022 - 226073765354.3
trna (guanosine(18)-2'-o)-methyltransferase trmhKW89_RS11275P0AGJ3Positive2260837 - 226151124955.8
rida family proteinKW89_RS11280Not AvailablePositive2261540 - 226194414848.7
response regulatorKW89_RS11285Not AvailableNegative2261969 - 226291034344.4
mfs transporterKW89_RS11290Not AvailableNegative2263060 - 226367722589.5
hypothetical proteinKW89_RS17990Not AvailableNegative2263748 - 22639186396.93

Displaying genes 2471 – 2480 of 3454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.