Piscirickettsia salmonis str. PM15972A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM15972A1 is characterized by a complex genomic structure comprising five replicons. The organism's genetic information is cataloged under several genome accessions, including NZ_CP012416.1, NZ_CP012414.1, NZ_CP012413.1, NZ_CP012415.1, and NZ_CP012417.1, reflecting its genomic diversity and potential adaptability. The presence of multiple replicons suggests a unique evolutionary strategy that may enable the microbe to optimize its genetic functions and respond to environmental pressures in aquatic habitats. This trait is particularly significant for understanding the organism's potential role in its ecological niche and its interactions with host organisms. The complexity inherent in the genomic structure of Piscirickettsia salmonis str. PM15972A1 highlights the importance of genomic studies in elucidating the functional capabilities and evolutionary pathways of marine microbes. These insights can facilitate further research into the biological significance of this strain within its aquatic ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM15972A1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3,

Gene Summary

Adenine Count

26069 bp

Thymine Count

24724 bp

Guanine Count

15821 bp

Cytosine Count

15516 bp

Genome Length

82130 bp

Protein-coding Genes

89 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spy/cpxp family protein refolding chaperoneKW89_RS10320Not AvailablePositive2072651 - 207314218277.6
hypothetical proteinKW89_RS10325Not AvailableNegative2073286 - 207377718034.6
rossmann-like and duf2520 domain-containing proteinKW89_RS10330Not AvailablePositive2073980 - 207487032068.6
nucleoside triphosphate pyrophosphataseKW89_RS10335Q3JAF4Positive2075037 - 207563622307.8
signal peptide peptidase sppaKW89_RS10340O34525Negative2075717 - 207665534529.8
fusc family proteinKW89_RS10345Not AvailableNegative2076707 - 207780140741.1
na+/h+ antiporter nhaaKW89_RS10350Q21JV7Positive2077926 - 207924247721.6
nad-glutamate dehydrogenaseKW89_RS10355Q9HZE0Negative2079297 - 2084186185447.0
duf2835 family proteinKW89_RS10360Not AvailableNegative2084279 - 208458411613.2
prka family serine protein kinaseKW89_RS10365P0ACY5Positive2084692 - 208661473819.4

Displaying genes 2281 – 2290 of 3454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.