Piscirickettsia salmonis str. PM15972A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM15972A1 is characterized by a complex genomic structure comprising five replicons. The organism's genetic information is cataloged under several genome accessions, including NZ_CP012416.1, NZ_CP012414.1, NZ_CP012413.1, NZ_CP012415.1, and NZ_CP012417.1, reflecting its genomic diversity and potential adaptability. The presence of multiple replicons suggests a unique evolutionary strategy that may enable the microbe to optimize its genetic functions and respond to environmental pressures in aquatic habitats. This trait is particularly significant for understanding the organism's potential role in its ecological niche and its interactions with host organisms. The complexity inherent in the genomic structure of Piscirickettsia salmonis str. PM15972A1 highlights the importance of genomic studies in elucidating the functional capabilities and evolutionary pathways of marine microbes. These insights can facilitate further research into the biological significance of this strain within its aquatic ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM15972A1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3,

Gene Summary

Adenine Count

26069 bp

Thymine Count

24724 bp

Guanine Count

15821 bp

Cytosine Count

15516 bp

Genome Length

82130 bp

Protein-coding Genes

89 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nupc/nupg family nucleoside cnt transporterKW89_RS07310O32115Positive1445272 - 144650143801.7
hypothetical proteinKW89_RS19090Not AvailablePositive1446494 - 14466255068.35
fimv/hubp family polar landmark proteinKW89_RS07315Not AvailableNegative1446696 - 144725921732.7
anti-phage deoxyguanosine triphosphataseKW89_RS07320A1RJX1Positive1447334 - 144869252109.7
single-stranded dna-binding proteinKW89_RS07325P40947Negative1448943 - 144967126799.2
excinuclease abc subunit uvraKW89_RS07330Q9HWG0Positive1450044 - 1452863103460.0
is630 transposase-related proteinKW89_RS07335Not AvailablePositive1453018 - 145336814067.0
hypothetical proteinKW89_RS18230Not AvailableNegative1453730 - 14538765979.34
is3 family transposaseKW89_RS17045Not AvailableNegative1453910 - 14540475457.56
is30 family transposaseKW89_RS07340Not AvailablePositive1454193 - 145516737511.6

Displaying genes 1641 – 1650 of 3454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.