Piscirickettsia salmonis str. PM15972A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Piscirickettsia

Description

Piscirickettsia salmonis str. PM15972A1 is characterized by a complex genomic structure comprising five replicons. The organism's genetic information is cataloged under several genome accessions, including NZ_CP012416.1, NZ_CP012414.1, NZ_CP012413.1, NZ_CP012415.1, and NZ_CP012417.1, reflecting its genomic diversity and potential adaptability. The presence of multiple replicons suggests a unique evolutionary strategy that may enable the microbe to optimize its genetic functions and respond to environmental pressures in aquatic habitats. This trait is particularly significant for understanding the organism's potential role in its ecological niche and its interactions with host organisms. The complexity inherent in the genomic structure of Piscirickettsia salmonis str. PM15972A1 highlights the importance of genomic studies in elucidating the functional capabilities and evolutionary pathways of marine microbes. These insights can facilitate further research into the biological significance of this strain within its aquatic ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusPiscirickettsia
SpeciesPiscirickettsia salmonis
StrainPM15972A1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3,

Gene Summary

Adenine Count

26069 bp

Thymine Count

24724 bp

Guanine Count

15821 bp

Cytosine Count

15516 bp

Genome Length

82130 bp

Protein-coding Genes

89 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid a biosynthesis acyltransferaseKW89_RS04315P0ACV1Positive823544 - 82442834099.1
crcb family proteinKW89_RS04320Q2K819Negative824437 - 82483213981.3
eal domain-containing proteinKW89_RS04325Q9I310Positive825260 - 82740780883.0
hlyd family type i secretion periplasmic adaptor subunitKW89_RS04330P16534Negative827379 - 82872850384.6
peptidase domain-containing abc transporterKW89_RS04335Q8FDZ8Negative828725 - 83084578289.1
peptidase domain-containing abc transporterKW89_RS04340Q46717Negative830842 - 83254563805.2
galactokinaseKW89_RS04345A5UZX0Negative832664 - 83380642171.4
udp-glucose--hexose-1-phosphate uridylyltransferaseKW89_RS04350P22714Negative833871 - 83489939481.7
d-alanyl-d-alanine carboxypeptidase family proteinKW89_RS04355P0AEB4Positive835059 - 83654052688.0
hypothetical proteinKW89_RS17665Not AvailableNegative836630 - 83711518102.5

Displaying genes 1021 – 1030 of 3454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.