Chlorobium limicola str. Frasassi

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Chlorobiota

Class

Chlorobiia

Order

Chlorobiales

Family

Chlorobiaceae

Genus

Chlorobium

Description

Chlorobium limicola strain Frasassi is a Gram-negative, rod-shaped bacterium that typically exists in chains or as single cells, and is known for its photosynthetic capabilities as a photoautotroph. This organism thrives in aquatic environments, where it plays a significant role in the cycling of nutrients and energy within its ecosystem. As an anaerobe, Chlorobium limicola strain Frasassi relies on light for energy while utilizing carbon dioxide for growth, contributing to the biological processes in light-limited habitats. The ability of this strain to perform photosynthesis in anaerobic conditions suggests a unique adaptation to its environment, allowing it to exploit light energy in settings where oxygen is scarce. This trait not only highlights its ecological role in aquatic ecosystems but also underscores the importance of anaerobic phototrophs in global carbon cycling. By converting light energy into chemical energy, Chlorobium limicola strain Frasassi aids in the sustenance of microbial communities, potentially influencing the dynamics of food webs in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumChlorobiota
ClassChlorobiia
OrderChlorobiales
FamilyChlorobiaceae
GenusChlorobium
SpeciesChlorobium limicola
StrainFrasassi

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Chlorobium limicola str. Frasassi
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourcePhotosynthetic - Photoautotroph
PathogenicityNot Available

Genome Summary

Chlorobium limicola strain Frasassi contig-124_982, whole genome

Gene Summary

Adenine Count

521084 bp

Thymine Count

508606 bp

Guanine Count

527254 bp

Cytosine Count

530505 bp

Genome Length

2087449 bp

Protein-coding Genes

1841 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogenase molybdenum-iron protein subunit betaASB62_00285Not AvailableNegative60116 - 6149550754.3
nitrogenase molybdenum-iron protein alpha chainASB62_00290Not AvailableNegative61521 - 6316161256.3
nitrogen fixation proteinASB62_00295Not AvailableNegative63199 - 6357613422.4
nitrogen fixation protein nifhdASB62_00300Not AvailableNegative63576 - 6392912893.8
nitrogenase reductaseASB62_00305Not AvailableNegative63948 - 6477230185.3
aldo/keto reductaseASB62_00310Not AvailablePositive65774 - 6673335356.3
histidine kinaseASB62_00315Not AvailableNegative66772 - 6881176462.9
nif-specific transcriptional activator nifaASB62_00320Not AvailableNegative69046 - 7068061761.1
homocitrate synthaseASB62_00325Not AvailableNegative70686 - 7185541860.0
sulfurtransferaseASB62_00330Not AvailablePositive72376 - 7285518093.5

Displaying genes 61 – 70 of 1881 in total

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.