Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Acetobacterales
Family
Acetobacteraceae
Genus
Rhodopila
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Acetobacterales |
| Family | Acetobacteraceae |
| Genus | Rhodopila |
| Species | Rhodopila globiformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | acid spring; acidic warm spring; Lassen Volcanic National Park; microbial mat; spring; spring in Lassen Volcanic National Park (USA); strongly acidic habitats; sulfidic and acidic (pH 3-4) spring; sulfidic spring; Yellowstone; Yellowstone National Park |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1192225 bp
Thymine Count
1191878 bp
Guanine Count
2431073 bp
Cytosine Count
2432651 bp
Genome Length
7248147 bp
Protein-coding Genes
6196 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CCS01_14705 | Not Available | Negative | 3281520 - 3282428 | 34447.0 |
| benzoate 1,2-dioxygenase large subunit | CCS01_14710 | Not Available | Positive | 3282716 - 3284062 | 51076.7 |
| benzoate 1,2-dioxygenase small subunit | CCS01_14715 | Not Available | Positive | 3284076 - 3284603 | 20371.9 |
| nadh oxidase | CCS01_14720 | Not Available | Positive | 3284620 - 3285660 | 37085.0 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | CCS01_14725 | Not Available | Positive | 3285674 - 3286459 | 27785.0 |
| catechol 1,2-dioxygenase | CCS01_14730 | Not Available | Positive | 3286531 - 3287460 | 34059.4 |
| mandelate racemase | CCS01_14735 | Not Available | Positive | 3287567 - 3288724 | 40881.3 |
| muconolactone delta-isomerase | CCS01_14740 | Not Available | Positive | 3288734 - 3289018 | 10737.0 |
| 3-keto-5-aminohexanoate cleavage protein | CCS01_14745 | Not Available | Positive | 3289074 - 3289907 | 30024.1 |
| hypothetical protein | CCS01_14750 | Not Available | Positive | 3290243 - 3290566 | 11606.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
