Rhodopila globiformis

CoccusMotileanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Rhodopila

Description

Rhodopila globiformis is a coccus-shaped anaerobic microbe found predominantly in strongly acidic and sulfidic habitats, such as the acidic warm springs of Lassen Volcanic National Park and Yellowstone National Park in the USA. This microorganism thrives in environments characterized by a pH range of 3 to 4, which are typical of microbial mats associated with these unique geothermal settings. The ability of Rhodopila globiformis to inhabit such extreme conditions suggests that it has specialized metabolic pathways that allow it to utilize the available resources in these low-pH ecosystems effectively. The presence of this microbe in sulfidic springs indicates a potential role in biogeochemical cycling, particularly concerning sulfur compounds in acidic environments. Understanding the physiology and ecological role of Rhodopila globiformis may provide insights into the adaptations required for life in extreme conditions and its contributions to the microbial community structure and function in acidic thermal springs. The study of such extremophiles is crucial for unraveling the complexities of microbial life and its resilience in harsh environments, as well as for potential biotechnological applications in bioremediation or bioenergy production in similarly extreme habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusRhodopila
SpeciesRhodopila globiformis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCoccus
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatacid spring; acidic warm spring; Lassen Volcanic National Park; microbial mat; spring; spring in Lassen Volcanic National Park (USA); strongly acidic habitats; sulfidic and acidic (pH 3-4) spring; sulfidic spring; Yellowstone; Yellowstone National Park
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopila globiformis strain DSM 161 scaffold0278, whole genome

Gene Summary

Adenine Count

1192225 bp

Thymine Count

1191878 bp

Guanine Count

2431073 bp

Cytosine Count

2432651 bp

Genome Length

7248147 bp

Protein-coding Genes

6196 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component sensor histidine kinaseCCS01_06050Not AvailableNegative1334775 - 133706982691.5
nitrogen regulation protein nr(i)CCS01_06055Not AvailableNegative1337089 - 133854953422.5
two-component sensor histidine kinaseCCS01_06060Not AvailableNegative1338546 - 133967640802.2
trna dihydrouridine synthase dusbCCS01_06065Not AvailableNegative1339673 - 134077939029.3
hypothetical proteinCCS01_06070Not AvailablePositive1340892 - 134260460236.9
hypothetical proteinCCS01_06075Not AvailableNegative1342888 - 134351722226.8
decarboxylaseCCS01_06080Not AvailableNegative1343529 - 134404718812.1
fad-binding dehydrogenaseCCS01_06085Not AvailablePositive1344140 - 134554050550.4
hypothetical proteinCCS01_06090Not AvailablePositive1345527 - 134663640063.2
hypothetical proteinCCS01_06095Not AvailableNegative1346637 - 134719719639.5

Displaying genes 1181 – 1190 of 6250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.