Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigj | NCTC12722_00903 | Not Available | Positive | 916875 - 917750 | 31251.4 |
| 16 kda heat shock protein a | NCTC12722_00904 | Not Available | Negative | 917805 - 918287 | 17547.7 |
| phospholipase ytpa | NCTC12722_00905 | Not Available | Positive | 918549 - 919493 | 34507.5 |
| sulfite exporter taue/safe | NCTC12722_00906 | Not Available | Negative | 919513 - 920268 | 27285.7 |
| cyn operon transcriptional activator | NCTC12722_00907 | Not Available | Positive | 920369 - 921265 | 32266.5 |
| histidinol-phosphatase | NCTC12722_00908 | Not Available | Negative | 921270 - 922052 | 28556.1 |
| predicted n-formylglutamate amidohydrolase | NCTC12722_00910 | Not Available | Negative | 922646 - 923536 | 33252.2 |
| c4-dicarboxylate transport transcriptional regulatory protein dctd | NCTC12722_00911 | Not Available | Positive | 923720 - 924088 | 13706.6 |
| Trna-val | Not Available | Not Available | Positive | 924200 - 924274 | Not Available |
| site-specific tyrosine recombinase xerc | NCTC12722_00913 | Not Available | Positive | 924383 - 925381 | 38574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
