Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC12722_00852 | Not Available | Negative | 862658 - 862819 | 6225.81 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 863034 - 865849 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 865922 - 866035 | Not Available |
| uncharacterised protein | NCTC12722_00855 | Not Available | Positive | 866287 - 866871 | 20977.0 |
| protein of uncharacterised function (duf3775) | NCTC12722_00856 | Not Available | Positive | 867009 - 867428 | 15104.6 |
| Trna-met | Not Available | Not Available | Positive | 867623 - 867699 | Not Available |
| acid-resistance membrane protein | NCTC12722_00858 | Not Available | Negative | 867771 - 868334 | 20151.6 |
| leucine abc transporter subunit substrate-binding protein livk | NCTC12722_00859 | Not Available | Positive | 868825 - 870177 | 48984.4 |
| liv-i protein h | NCTC12722_00860 | Not Available | Positive | 870335 - 871210 | 30924.2 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC12722_00861 | Not Available | Positive | 871224 - 873092 | 67224.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
