Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein d precursor | NCTC12722_00761 | Not Available | Negative | 776859 - 778355 | 52454.8 |
| flp pilus assembly protein, protease cpaa | NCTC12722_00762 | Not Available | Negative | 778470 - 778994 | 18866.6 |
| flp pilus assembly protein, pilin flp | NCTC12722_00763 | Not Available | Negative | 779300 - 779467 | 5545.75 |
| flp pilus assembly protein cpab | NCTC12722_00764 | Not Available | Positive | 779833 - 780654 | 28687.1 |
| flp pilus assembly protein tadg | NCTC12722_00765 | Not Available | Positive | 780810 - 781355 | 19694.6 |
| flp pilus assembly protein tadg | NCTC12722_00766 | Not Available | Positive | 781356 - 781958 | 21484.1 |
| cs7.4 | NCTC12722_00767 | Not Available | Negative | 782070 - 782282 | 7505.81 |
| translation initiation factor if-1 | NCTC12722_00768 | Not Available | Negative | 782506 - 782784 | 10603.9 |
| atp-dependent rna helicase rhle | NCTC12722_00769 | Not Available | Negative | 782803 - 784305 | 54473.2 |
| blue-light-activated histidine kinase | NCTC12722_00770 | Not Available | Positive | 785263 - 786903 | 59840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
