Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 3383112 - 3383124 | Not Available |
| Integrase | NCTC12722_03309 | Not Available | Positive | 3383462 - 3384655 | 44547.5 |
| chromosomal replication initiator protein dnaa | NCTC12722_00001 | Not Available | Positive | 1 - 1434 | 53020.9 |
| dna polymerase iii subunit beta | NCTC12722_00002 | Not Available | Positive | 1606 - 2721 | 40489.6 |
| dna replication and repair protein recf | NCTC12722_00003 | Not Available | Positive | 2900 - 4036 | 40844.9 |
| dna gyrase subunit b | NCTC12722_00004 | Not Available | Positive | 4277 - 6709 | 89068.5 |
| n-glycosyltransferase | NCTC12722_00005 | Not Available | Positive | 6874 - 7800 | 34370.4 |
| polysaccharide biosynthesis protein | NCTC12722_00006 | Not Available | Negative | 7792 - 9084 | 46814.6 |
| uncharacterised protein | NCTC12722_00007 | Not Available | Negative | 9311 - 10036 | 26361.3 |
| putative protein-s-isoprenylcysteine methyltransferase | NCTC12722_00008 | Not Available | Negative | 10149 - 10718 | 20991.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
