Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC12722_00641 | Not Available | Negative | 644942 - 645253 | 11551.7 |
| predicted exporter | NCTC12722_00642 | Not Available | Positive | 645506 - 647878 | 85087.9 |
| uncharacterised protein | NCTC12722_00643 | Not Available | Negative | 647962 - 648465 | 17339.2 |
| virulence protein stm3117 | NCTC12722_00644 | Not Available | Negative | 648706 - 649116 | 14577.3 |
| methyl-accepting chemotaxis protein 4 | NCTC12722_00645 | Not Available | Positive | 649252 - 651321 | 72089.6 |
| uncharacterised protein | NCTC12722_00646 | Not Available | Positive | 651584 - 651745 | 5811.32 |
| Trna-arg | Not Available | Not Available | Positive | 651866 - 651942 | Not Available |
| nhl repeat | NCTC12722_00648 | Not Available | Positive | 652098 - 653582 | 53627.3 |
| glutamate synthase | NCTC12722_00649 | Not Available | Positive | 653808 - 655433 | 58988.3 |
| opacity protein and related surface antigens | NCTC12722_00650 | Not Available | Negative | 655437 - 657353 | 69236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
