Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC12722_00460 | Not Available | Negative | 464879 - 465205 | 12680.3 |
| uncharacterised protein | NCTC12722_00461 | Not Available | Negative | 465505 - 465954 | 15720.3 |
| copper-exporting p-type atpase a | NCTC12722_00462 | Not Available | Positive | 466405 - 466671 | 8718.33 |
| copper-exporting p-type atpase a | NCTC12722_00463 | Not Available | Positive | 466658 - 469060 | 84082.9 |
| copper export regulator | NCTC12722_00464 | Not Available | Positive | 469060 - 469527 | 17887.2 |
| uncharacterised protein | NCTC12722_00465 | Not Available | Positive | 469555 - 469854 | 11105.3 |
| cholesterol dehydrogenase | NCTC12722_00466 | Not Available | Positive | 469993 - 472527 | 92142.0 |
| bifunctional 3-hydroxyacyl-coa dehydrogenase/thioesterase | NCTC12722_00467 | Not Available | Positive | 473161 - 473595 | 16426.7 |
| porphobilinogen deaminase | NCTC12722_00468 | Not Available | Positive | 474049 - 475026 | 34731.0 |
| cytochrome b561 homolog 2 | NCTC12722_00469 | Not Available | Negative | 475785 - 476327 | 19557.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
