Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iis restriction enzyme eco57i | NCTC12722_04050 | Not Available | Negative | 4141918 - 4145016 | 114587.0 |
| uncharacterised protein | NCTC12722_04051 | Not Available | Negative | 4145130 - 4145666 | 19998.4 |
| protein of uncharacterised function (duf1612) | NCTC12722_04052 | Not Available | Negative | 4145810 - 4147027 | 44823.1 |
| uncharacterised protein | NCTC12722_04053 | Not Available | Negative | 4147260 - 4147481 | 8002.14 |
| antitoxin of toxin-antitoxin stability system | NCTC12722_04054 | Not Available | Positive | 4147604 - 4147882 | 10384.4 |
| probable ribonuclease fitb | NCTC12722_04055 | Not Available | Positive | 4147879 - 4148316 | 15928.2 |
| uncharacterised protein | NCTC12722_04056 | Not Available | Positive | 4148313 - 4149401 | 40775.3 |
| site-specific tyrosine recombinase xerd | NCTC12722_04057 | Not Available | Positive | 4149415 - 4150596 | 43537.1 |
| sporulation initiation inhibitor protein soj | NCTC12722_04058 | Not Available | Positive | 4150810 - 4152012 | 44379.1 |
| plasmid partitioning protein repb | NCTC12722_04059 | Not Available | Positive | 4152009 - 4153031 | 37052.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
