Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinNCTC12722_03879Not AvailablePositive3971795 - 397281436845.5
atp-utilizing enzymes of the pp-loop superfamilyNCTC12722_03880Not AvailablePositive3972816 - 397344523320.9
modification methylase haeiiiNCTC12722_03881Not AvailablePositive3973414 - 397489254528.7
trna (cmo5u34)-methyltransferaseNCTC12722_03882Not AvailablePositive3974879 - 397556525881.9
uncharacterised proteinNCTC12722_03883Not AvailablePositive3975708 - 397660433054.4
uncharacterised proteinNCTC12722_03884Not AvailablePositive3976869 - 397744421737.3
rna polymerase-associated protein rapaNCTC12722_03885Not AvailableNegative3977592 - 3981269135414.0
putative recb family nuclease, tm0106 familyNCTC12722_03886Not AvailablePositive3981515 - 3984928124621.0
uncharacterised proteinNCTC12722_03887Not AvailableNegative3985460 - 39857089238.94
domain of uncharacterised function (duf892)NCTC12722_03888Not AvailableNegative3985995 - 398649218065.5

Displaying genes 3861 – 3870 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total