Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| liv-i protein f | NCTC12722_03598 | Not Available | Negative | 3683659 - 3684366 | 25714.7 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC12722_03599 | Not Available | Negative | 3684363 - 3685115 | 27230.0 |
| leucine/isoleucine/valine transporter permease subunit | NCTC12722_03600 | Not Available | Negative | 3685121 - 3686128 | 36065.6 |
| liv-i protein h | NCTC12722_03601 | Not Available | Negative | 3686125 - 3686979 | 29633.6 |
| aliphatic nitrilase | NCTC12722_03602 | Not Available | Positive | 3687594 - 3688658 | 38340.3 |
| malonyl-coa decarboxylase (mcd) | NCTC12722_03603 | Not Available | Positive | 3688651 - 3690018 | 51420.4 |
| long-chain-fatty-acid--coa ligase | NCTC12722_03604 | Not Available | Positive | 3690037 - 3691566 | 55186.6 |
| pyridoxamine 5'-phosphate oxidase, fmn-binding family | NCTC12722_03605 | Not Available | Negative | 3691581 - 3692534 | 35200.0 |
| gst-like protein yfcg | NCTC12722_03606 | Not Available | Negative | 3692548 - 3693168 | 22818.3 |
| d-malate degradation protein r | NCTC12722_03607 | Not Available | Positive | 3693272 - 3694186 | 33446.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
