Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
liv-i protein fNCTC12722_03598Not AvailableNegative3683659 - 368436625714.7
lipopolysaccharide export system atp-binding protein lptbNCTC12722_03599Not AvailableNegative3684363 - 368511527230.0
leucine/isoleucine/valine transporter permease subunitNCTC12722_03600Not AvailableNegative3685121 - 368612836065.6
liv-i protein hNCTC12722_03601Not AvailableNegative3686125 - 368697929633.6
aliphatic nitrilaseNCTC12722_03602Not AvailablePositive3687594 - 368865838340.3
malonyl-coa decarboxylase (mcd)NCTC12722_03603Not AvailablePositive3688651 - 369001851420.4
long-chain-fatty-acid--coa ligaseNCTC12722_03604Not AvailablePositive3690037 - 369156655186.6
pyridoxamine 5'-phosphate oxidase, fmn-binding familyNCTC12722_03605Not AvailableNegative3691581 - 369253435200.0
gst-like protein yfcgNCTC12722_03606Not AvailableNegative3692548 - 369316822818.3
d-malate degradation protein rNCTC12722_03607Not AvailablePositive3693272 - 369418633446.7

Displaying genes 3581 – 3590 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total