Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2852) | NCTC12722_03527 | Not Available | Negative | 3612367 - 3612867 | 19738.4 |
| dna-binding transcriptional repressor fabr | NCTC12722_03528 | Not Available | Negative | 3612969 - 3613625 | 23696.4 |
| acyl-coa thioester hydrolase ybgc | NCTC12722_03529 | Not Available | Negative | 3613676 - 3614152 | 17671.3 |
| holliday junction atp-dependent dna helicase ruvb | NCTC12722_03530 | Not Available | Negative | 3614170 - 3615210 | 37638.2 |
| holliday junction atp-dependent dna helicase ruva | NCTC12722_03531 | Not Available | Negative | 3615207 - 3615824 | 21627.1 |
| crossover junction endodeoxyribonuclease ruvc | NCTC12722_03532 | Not Available | Negative | 3615821 - 3616336 | 17984.1 |
| magnesium transporter mgte | NCTC12722_03533 | Not Available | Negative | 3616374 - 3617741 | 49462.6 |
| probable transcriptional regulatory protein aq_1575 | NCTC12722_03534 | Not Available | Negative | 3617974 - 3618720 | 26696.4 |
| metallophosphoesterase, mg_246/bb_0505 family | NCTC12722_03535 | Not Available | Negative | 3618838 - 3619665 | 29361.9 |
| 5-formyltetrahydrofolate cyclo-ligase family protein | NCTC12722_03536 | Not Available | Negative | 3619671 - 3620240 | 20716.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
