Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase | NCTC12722_03407 | Not Available | Positive | 3489519 - 3490673 | 42081.2 |
| uncharacterised protein | NCTC12722_03408 | Not Available | Negative | 3490721 - 3491338 | 21336.6 |
| shikimate dehydrogenase | NCTC12722_03409 | Not Available | Negative | 3491399 - 3492247 | 29783.7 |
| putative sulfate transporter ychm | NCTC12722_03410 | Not Available | Negative | 3492306 - 3494069 | 61099.4 |
| protein of uncharacterised function (duf992) | NCTC12722_03411 | Not Available | Negative | 3494066 - 3494554 | 16313.5 |
| protein of uncharacterised function (duf992) | NCTC12722_03412 | Not Available | Negative | 3494717 - 3495241 | 18057.5 |
| aspartate aminotransferase | NCTC12722_03413 | Not Available | Negative | 3495368 - 3496570 | 43165.7 |
| protein of uncharacterised function (duf2029) | NCTC12722_03414 | Not Available | Positive | 3496782 - 3498026 | 44300.8 |
| gst-like protein yfcg | NCTC12722_03415 | Not Available | Positive | 3498190 - 3498828 | 24409.2 |
| uncharacterised protein | NCTC12722_03416 | Not Available | Positive | 3498973 - 3499134 | 5630.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
