Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase and inactivated derivatives | NCTC12722_00259 | Not Available | Negative | 263710 - 265209 | 56549.3 |
| integrase core domain | NCTC12722_00260 | Not Available | Positive | 265326 - 265775 | 16878.2 |
| uncharacterised protein | NCTC12722_00261 | Not Available | Positive | 265838 - 266146 | 11669.9 |
| uncharacterised protein | NCTC12722_00262 | Not Available | Negative | 266282 - 267004 | 27424.1 |
| uncharacterised protein | NCTC12722_00263 | Not Available | Negative | 267049 - 268005 | 37342.9 |
| uncharacterised protein | NCTC12722_00264 | Not Available | Negative | 268120 - 268977 | 32091.6 |
| dtdp-glucose 4,6 dehydratase | NCTC12722_00265 | Not Available | Negative | 269559 - 269711 | 5546.54 |
| trans-aconitate methyltransferase | NCTC12722_00266 | Not Available | Negative | 269787 - 270704 | 35101.6 |
| uncharacterised protein | NCTC12722_00267 | Not Available | Positive | 271221 - 272024 | 31113.1 |
| trans-aconitate methyltransferase | NCTC12722_00268 | Not Available | Positive | 272008 - 276408 | 166137.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
