Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC12722_03386 | Not Available | Positive | 3467266 - 3467481 | 7663.93 |
| predicted atpase (aaa+ superfamily) | NCTC12722_03387 | Not Available | Positive | 3468001 - 3468894 | 33940.4 |
| Trna-glu | Not Available | Not Available | Positive | 3468991 - 3469065 | Not Available |
| uncharacterised protein | NCTC12722_03389 | Not Available | Negative | 3469129 - 3469419 | 10258.8 |
| ribosomal large subunit pseudouridine synthase d | NCTC12722_03390 | Not Available | Positive | 3469463 - 3470494 | 36984.2 |
| rna polymerase sigma-32 factor | NCTC12722_03391 | Not Available | Positive | 3470717 - 3471616 | 34050.8 |
| uncharacterised protein | NCTC12722_03392 | Not Available | Negative | 3471673 - 3472131 | 16786.0 |
| uncharacterised protein | NCTC12722_03393 | Not Available | Positive | 3472465 - 3472683 | 7710.2 |
| methionyl-trna formyltransferase | NCTC12722_03394 | Not Available | Negative | 3472758 - 3473360 | 21313.8 |
| uncharacterised protein | NCTC12722_03395 | Not Available | Negative | 3473363 - 3474880 | 54640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
