Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap | NCTC12722_03100 | Not Available | Negative | 3189715 - 3190032 | 12344.0 |
| methylisocitrate lyase | NCTC12722_03101 | Not Available | Negative | 3190054 - 3190968 | 32878.9 |
| 2-methylcitrate synthase | NCTC12722_03102 | Not Available | Negative | 3190978 - 3192153 | 42689.2 |
| 2-methylcitrate dehydratase | NCTC12722_03103 | Not Available | Negative | 3192252 - 3193763 | 55167.5 |
| uncharacterized acyl-coa thioester hydrolase hi_0827 | NCTC12722_03104 | Not Available | Negative | 3193788 - 3194213 | 15224.1 |
| morphology and auto-aggregation control protein | NCTC12722_03105 | Not Available | Negative | 3194509 - 3195411 | 33162.4 |
| haloacetate dehalogenase h-1 | NCTC12722_03106 | Not Available | Positive | 3195628 - 3196539 | 33653.9 |
| putative transporter yfdv | NCTC12722_03107 | Not Available | Negative | 3196536 - 3197468 | 32691.4 |
| uncharacterised protein | NCTC12722_03108 | Not Available | Negative | 3197426 - 3197647 | 7902.79 |
| inner membrane transport protein ynfm | NCTC12722_03109 | Not Available | Positive | 3197704 - 3198948 | 43717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
