Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase a | NCTC12722_02969 | Not Available | Positive | 3050454 - 3051560 | 40765.4 |
| l-aspartate oxidase | NCTC12722_02970 | Not Available | Positive | 3051623 - 3053221 | 55202.2 |
| probable nicotinate-nucleotide pyrophosphorylase | NCTC12722_02971 | Not Available | Positive | 3053218 - 3054105 | 30914.6 |
| germination-specific amidase | NCTC12722_02972 | Not Available | Negative | 3054115 - 3055512 | 50481.8 |
| pyruvate, phosphate dikinase | NCTC12722_02973 | Not Available | Negative | 3055791 - 3058706 | 105308.0 |
| protein of uncharacterised function (duf3096) | NCTC12722_02974 | Not Available | Negative | 3058823 - 3058969 | 5140.92 |
| protein of uncharacterised function (duf1236) | NCTC12722_02975 | Not Available | Positive | 3059182 - 3059538 | 12923.6 |
| glycine--trna ligase beta subunit | NCTC12722_02976 | Not Available | Negative | 3059618 - 3061693 | 76167.8 |
| glycine--trna ligase alpha subunit | NCTC12722_02977 | Not Available | Negative | 3061696 - 3062625 | 34973.4 |
| uncharacterised protein | NCTC12722_02978 | Not Available | Negative | 3062766 - 3062951 | 6838.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
